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Handle _R_CHECK_DEPENDS_ONLY_ correctly for other.Rraw to work in -occasional CI #7832

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Handle _R_CHECK_DEPENDS_ONLY_ correctly for other.Rraw to work in -occasional CI #7832

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349344a
Gemini: handle _R_CHECK_DEPENDS_ONLY_ correctly for other.Rraw
MichaelChirico Jul 23, 2026
18af44d
remove extraneous "
MichaelChirico Jul 23, 2026
4bd5fff
not so extraneous after all... should be ` anyway
MichaelChirico Jul 23, 2026
b9a4aa0
Gemini: --as-cran always does the sandbox thing, so edit DESCRIPTION …
MichaelChirico Jul 23, 2026
a46b7c9
Gemini: resolve <libintl.h> absence on macOS
MichaelChirico Jul 23, 2026
0e03718
Use toString, unique
MichaelChirico Jul 23, 2026
cf71086
annotate job with locale
MichaelChirico Jul 24, 2026
230bb41
Gemini: Correct handling of error branch
MichaelChirico Jul 27, 2026
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20 changes: 17 additions & 3 deletions .github/workflows/R-CMD-check-occasional.yaml
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Original file line number Diff line number Diff line change
@@ -1,4 +1,5 @@
on:
push:
schedule:
- cron: '17 13 23 * *' # 23rd of month at 13:17 UTC
workflow_dispatch:
Expand All @@ -10,7 +11,7 @@ jobs:
R-CMD-check-occasional:
runs-on: ${{ matrix.os }}

name: ${{ matrix.os }} (${{ matrix.r }})
name: ${{ matrix.os }} (${{ matrix.r }}, ${{ matrix.locale }})

strategy:
fail-fast: false
Expand Down Expand Up @@ -75,9 +76,17 @@ jobs:
sudo apt-get update
sudo apt-get install -y libcurl4-openssl-dev libudunits2-dev libgdal-dev libgeos-dev libproj-dev pandoc
- name: Install R Package Build Dependencies on MacOS
if: matrix.os == 'macOS-latest'
uses: r-hub/actions/setup-r-sysreqs@v1
with:
type: 'minimal'

- name: Install check dependencies (macOS)
if: matrix.os == 'macOS-latest'
run: brew install gdal proj
run: |
brew install gdal proj gettext
brew link --force gettext
- name: Check
env:
Expand Down Expand Up @@ -106,6 +115,11 @@ jobs:
message(sprintf("Skipping other.Rraw since some required packages are not available: %s\n", toString(other_pkgs[!has_other_pkg])))
}
message("Will try and set TEST_DATA_TABLE_WITH_OTHER_PACKAGES=", as.character(run_other), " in R CMD check.")
if (run_other) {
desc = read.dcf("DESCRIPTION")
desc[1L, "Suggests"] = toString(unique(c(desc[1, "Suggests"], other_pkgs)))
write.dcf(desc, "DESCRIPTION")
}
# IINM rcmdcheck isolates its env from the calling process', besides what's passed to env=
env = c(
TEST_DATA_TABLE_WITH_OTHER_PACKAGES=as.character(run_other)
Expand All @@ -128,7 +142,7 @@ jobs:
dt_tar = list.files(pattern = "^data[.]table_.*[.]tar[.]gz$")
if (!length(dt_tar)) stop("Built tar.gz not found among: ", toString(list.files()))
res = system2(Rbin, c("CMD", "check", dt_tar[1L], check_args), stdout=TRUE, stderr=TRUE, env=sprintf("%s=%s", names(env), env))
if (!is.null(attr(res, "status")) || is.na(res) || grep("^Status:.*(ERROR|WARNING)", res)) {
if (!is.null(attr(res, "status")) || anyNA(res) || any(grepl("^Status:.*(ERROR|WARNING)", res))) {
writeLines(as.character(res))
stop("R CMD check failed")
}
Expand Down
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